dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00812
Location and strand information: 71976 - 72905 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00813
Location and strand information: 72916 - 73773 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Trehalose transport system permease protein SugB

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00814
Location and strand information: 73857 - 74675 (-)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00815
Location and strand information: 74786 - 76342 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0706
Protein molecular weight: 57515.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00816
Location and strand information: 76346 - 77491 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 4.9807
Protein molecular weight: 44338.39
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00817
Location and strand information: 77583 - 78428 (-)
Family: HTH_6
Protein type: TF
Protein description: HTH-type transcriptional regulator MurR

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00818
Location and strand information: 78913 - 80265 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00819
Location and strand information: 80396 - 81292 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002610_3|CGC2
Gene ID: MGYG000002610_00820
Location and strand information: 81307 - 82278 (+)
Family: 3.A.1.1.48
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002610_00812	Lactose transport system permease protein LacF	TC	71976	72905	+	3.A.1.1.11
MGYG000002610_00813	Trehalose transport system permease protein SugB	TC	72916	73773	+	3.A.1.1.11
MGYG000002610_00814	HTH-type transcriptional activator RhaR	TF	73857	74675	-	HTH_AraC+HTH_AraC
MGYG000002610_00815	hypothetical protein	CAZyme	74786	76342	+	GH28
MGYG000002610_00816	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	76346	77491	+	GH105
MGYG000002610_00817	HTH-type transcriptional regulator MurR	TF	77583	78428	-	HTH_6
MGYG000002610_00818	hypothetical protein	STP	78913	80265	+	SBP_bac_1
MGYG000002610_00819	Lactose transport system permease protein LacF	TC	80396	81292	+	3.A.1.1.36
MGYG000002610_00820	L-arabinose transport system permease protein AraQ	TC	81307	82278	+	3.A.1.1.48
Protein ID	Protein Name	Type	Start	End	Strand	Signature